Comparative genomics involves the examination and comparison of sequence, genes and regulatory regions between different organisms. Next generation sequencing of different organisms allows for a better understanding of the structure and function of genes and helps to identify those that are unique and those that are conserved among species. Comparisons of discrete segments of the genome is possible by alignment of homologous DNA between species. Comparisons between the human genome and the fruit fly have shown that up to 60% of genes are conserved. These alignments also help researchers identify signals that represent the location of genes and the sequences that regulate gene expression.
Several comparative genome tools have been developed to allow users to search for:
Expertise in mainly with plant genomes (wheat, tomato, potato, tobacco, rice, maize, diatoms and arabidopsis).
Access to over 800 cores (2.3Ghz and faster) SMP compute cluster. Access to over 50TB of raw storage. Computing infrastructure includes all commonly used bioinformatics software and databases. All computing infrastructure is maintained by a 24/7 IT service.
Other services offered by Biosof LLC:
Service | Description | Price |
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Differential Gene Expression Analysis | Inquire | |
Comparative Genome Analysis | Inquire | |
Custom scripting and special projects | Inquire | |
Read Filtering and Cleaning | Inquire | |
SNP / Indel Mapping | Inquire | |
Genome Mapping | Inquire | |
SNP / Indel Calling | Inquire | |
SNP/SV/CNV Discovery | Inquire | |
Genome Annotation | Inquire | |
Transcriptome de novo Assembly | Inquire | |
Transcriptome Annotation | Inquire | |
Variant Annotation | Inquire | |
Whole Genome de novo Assembly | Inquire |
Parseq Lab is experienced in: - massively parallel sequencing data analysis - client-tailored algorithms and software development - analysis pipelines deployment
We offer: - whole genome/exome and targeted sequencing data analysis - de novo assembly - SGV detection and annotation - expression analyses - metagenomics analysis - transcriptomics analysis - proteomics research - genuine task-specific workflows design - custom bioinformatics applications development - statistical data analysis
Collaborations: genomic research labs, sequencing facilities, academic and research institutions.
Years in service: 13Other services offered by Parseq Lab:
Service | Description | Price |
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Bioinformatics Services for Plant Scientists and Breeders by Computomics
At Computomics.com, we deliver in-depth NGS analyses. We start by identifying your breeding or research goals, devise a sequencing strategy to achieve them and define the project deliverables and timeline through an initial consultation. Our methods include the latest algorithms from the bioinformatics community.
We protect the security of your data. We use high-performance servers in a high-security data center with two-factor access control mechanisms. During the analysis, we use transparent, reliable processes and quickly deliver highly reproducible results in constant feedback with you, via virtual or onsite meetings at your location.
Our NGS products are exclusively focusing on plant species and their interacting microbes, and include:
Computomics collaborates with world-leading scientists, opening up an unprecedented opportunity for breeders and plant scientists. We provide data of the highest possible quality that expedite your crop improvement programs.
Years in service: 12Other services offered by Computomics:
Service | Description | Price |
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Differential Gene Expression Analysis | Gene expression studies, or RNAseq allow you to sequence the entire transcriptome of a plant, and provide valuable applications in crop improvement programs We and our collaborators have published peer reviewed methods for accurate gene expression analysis. Our RNAseq analyses can determine exact gene expression levels including splice variants. Using machine learning techniques, we identify dif… | Inquire |
Comparative Genome Analysis | We excel at managing complex crop genomic variance studies. Our analysis can help you obtain a set of genomic markers to enhance rational and controlled breeding procedures. Markers may include single nucleotide polymorphisms (SNPs), insertions and deletions (InDels), copy number variations (CNVs) or structural variants (SVs). Taking into account the properties of your plant of interest and the … | Inquire |
Other Services | Bioinformatics Consulting In addition to our next-generation sequencing (NGS) products and services, We also offer individual consulting services. With a team of scientists and partners who are thought leaders in crop genomics, we give impartial advice, independent of any sequencing platform, technology or tool suite. Each consultation is unique, please contact us to receive a quote for your sp… | Inquire |
Other Services | Introgression and Insertion Delineation Next-generation sequencing is a great tool for molecular characterisation of seeds with genetic modifications or introgressions. We can provide answers to many regulatory and safety related questions, such as: At how many sites was the DNA integrated into the plant genome? What is the exact sequence of each insert? Is the sequence rearranged with respect t… | Inquire |
Other Services | Genomic Selection with Continuous Model Improvement Genomic Selection with Continuous Model Improvement Genomic selection is a highly successful strategy to predict breeding values in plants. Advances in sequencing and high-throughput variant discovery enable the collection of tens of thousands of markers for hundreds of plants, providing exciting opportunities for unleashing the full power of g… | Inquire |
Read Filtering and Cleaning | Inquire | |
Metagenomic Analysis | World’s Fastest, Most Accurate Metagenomics Plants interacts constantly with soil-borne microbes. These interactions vary from symbiotic to pathogenic. In a metagenomics study of the rhizosphere, DNA or RNA are sequenced using next generation sequencing instruments. Sequences that do not originate from the plant host are analysed to identify genes and species contained within the sample. A tax… | Inquire |
Genome Annotation | We perform de novo genome annotation using the latest in silico predictive approaches and RNAseq reads. We offer two machine learning-based gene prediction methods that can be trained to recognise biological features in your crop’s genome. The resources we use to build an annotation map include existing annotations for related organisms, RNAseq data, and PacBio complete isoforms. We use all avai… | Inquire |
Methylation Analysis | Statistically Sound Epigenetics Non-genetic factors affect crops traits and phenotypes. Identifying epigenetic patterns allow breeders and plant scientists to uncover expression correlations and non-genetically inherited gene regulation patterns. We specialize in crop epigenetics. Methylation of cytosine residues is a known mechanism for gene silencing and gene expression regulation. We use bi… | Inquire |
Whole Genome de novo Assembly | We have a deep understanding of both de novo and reference-based genome assembly of large crop genomes. It is crucial to first develop an effective strategy before selecting the appropriate sequencing technology and bioinformatics tools. A de novo genome assembly project must address sources of error up front, like sequence bias and read quality. A crucial point is quality control. We compare o… | Inquire |
Other services offered by Bioinformatics Unit, Panacea Biosciences:
Service | Description | Price |
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Read Filtering and Cleaning | $40.00 USD (per sample) | |
Exome Analysis | End to End Exome-Seq Data Analysis | $75.00 USD (per sample) |
ChIP-Seq Analysis | we present step-by-step guidelines for the computational analysis of ChIP-seq data. We address all the major steps in the analysis of ChIP-seq data: sequencing depth selection, quality checking, mapping, data normalization, assessment of reproducibility, peak calling, differential binding analysis, controlling the false discovery rate, peak annotation, visualization, and motif analysis. | $80.00 USD (per sample) |
Genome Mapping | Available only for Human, Mouse and available sequenced geneomes | $75.00 USD (per sample) |
SNP/SV/CNV Discovery | End to End variant analysis | $70.00 USD (per sample) |
Small RNA Annotation | Available only for Human, Mouse and available sequenced geneomes | $60.00 USD (per sample) |
Base Calling | Base calling is the process of assigning bases (nucleobases) to chromatogram peaks. One computer program for accomplishing this job is Phred base-calling, which is a widely used basecalling software program by both academic and commercial DNA sequencing laboratories because of its high base calling accuracy. | $50.00 USD (per sample) |
We specialize in the services of DNA sequencing, genotyping, DNA library construction and aptamer development. Shotgun Library Sequencing, cDNA Library Sequencing, SAGE Library Sequencing, Whole Genome Sequencing and Primer Walking Sequencing. we offer high quality Re-sequencing & SNP Discovery Services. Quite a few of our staff scientists once participated in the International HapMap Project too.
extensive experience in whole genome shotgun sequencing services. Beginning from bacterial cells or genomic DNA, we provide you with accurate genome consensus sequences. We are also experienced in genome annotation and comparative genomics research. Notably our staff scientists have finished a number of whole microbial genome sequencing projects, such as the genomes of Pseudomonas bathycetes, Bacillus thuringiensis, Thermoanaerobacter tengcongensis, Streptococcus suis, and quite a few virus genomes. In addition, our in-house Laboratory Information Management System (LIMS) as well as manual basecalling ensures the highest service quality.
CD Genomics has been offering professional DNA library construction services for over 5 years. Hundreds of various cDNA libraries (such as standard cDNA library, large insert cDNA library, normalized cDNA library and subtracted cDNA library) and genomic DNA libraries (including short-insert plasmid shotgun library, large-insert plasmid shotgun library, whole genome shotgun library, Fosmid library, Cosmid library, MiniBAC and BAC library) have been constructed in our lab
CD Genomics has been dedicated to provide a full range of services to develop high quality customized aptamers for research, diagnostic and therapeutic applications. Services offered by CD Genomics include aptamer synthesis, aptamer generation, cell aptamer selection, aptamer design and modification, negative selection and so on.
Years in service: 19Other services offered by CD Genomics:
Service | Description | Price |
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Other Services | We provide statistical and bioinformatic data analysis services that help explain the large amounts of data commonly generated by next generation sequencing and genotyping experiments. Our bioinformatic staff consists of all PhD-level scientists trained in bioinformatics, biology and statistics. The software infrastructure for analysis is a combination of custom-built and open-source software. O… | Inquire |
SNP / Indel Mapping | CD genomics can help you analyze genetic variation efficiently to meet diverse research needs. By utilizing Affymetrix and Illumina array platforms, we support high-throughput and multiplex processing to meet diverse research needs, delivering high-quality data at a low per-sample cost. Advantages of SNP Microarray Custom, flexible, and scalable; High call rates (> 99%) and high accuracy; Cost-… | $80.00 USD (per sample) |
Metagenomic Analysis | Key Features and Advantages Longest average read lengths, with~50% of reads longer than 50kb, which exceeds the size of repetitive elements in the average bacterial genome. No DNA amplification. Highest consensus accuracy, low sequencing-context bias Novel bioinformatics analysis programs and pipelines Well-experienced personnel Sample Requirements: gDNA≥5 ug Sequencing Strategy: PacBio Platfo… | 120.00 |
Biopharmaceuticals and biotechnology --- Identify candidate biomarkers that correlate with outcomes Understand responders vs. non-responders during or post clinical trials Accelerate clinical trial enrollment by identifying patients for rare indications Analyze clinical trial results for efficiency and safety profile Leverage genetic information for label expansion with real world data Provide genetic testing for patient support program
Biobanks, research organizations and labs --- Research genomic profiles in-depth, often resulting in new biomarker identification, or re-classification Profile genomic characteristics of the acquired biospecimen to increase the value of your biospecimen assets
Health technology --- Leverage genetic information to provide precision health insights to your customers and users Generate real world evidence data including genetic information
Years in service: 1Other services offered by Inocras Inc.:
Service | Description | Price |
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Exome Analysis | Whole genome sequencing using the Illumina NovaSeq X+ (or Ultima Genomics UG100) instrumentation for overall high-throughput method that provides comprehensive insights into the entire genome. Here’s a brief overview for what you will get from us: Bioinformatics Analysis: World-class bioinformatics providing whole genome insights Analytics, interpretation, or/and report generation Curated data … | $799.00 USD (per sample) |
We offer a powerful genomics software platform that makes various bioinformatics tasks fairly straightforward to perform and deliver to customers. We also wrap this product with various service offerings for folks interested in one-off projects that deliver results rather than just subscribing to a software solution and then do the work themselves. We are comfortable with both scenarios. We are well versed in working with RNA-Seq, Genomes, Exomes, targeted panels, miRNA-Seq, Copy Number, Gene Expression, Protein Expression, and DNA Methylation from the level of raw sequencing reads or chip data all the way through to statistically-driven and knowledge-driven interpretations.
We are experienced in developing bioinformatics pipelines, providing data management solutions, analyzing the data using statistical methods and knowledge driven methods, and delivering professional-grade results. We are most familiar with human genomics projects, but have experience with other organisms as well. We are most focused on supporting sequencing projects, but are very capable of supporting array and PCR-based projects as well.
We leverage Amazon Web Services for most of our storage (EBS & S3) and computational resources (EC2). We are not frivolous about security, and we can provide you with security documentation to demonstrate how we leverage cloud resources while keeping best-in-class security. We also have powerful 16-core machines in our own private cloud that we leverage for service projects as well.
Years in service: 14Other services offered by Station X:
Service | Description | Price |
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Differential Gene Expression Analysis | $1655.00 USD (flat price) | |
Transcriptome Mapping | $100.00 USD (per sample) | |
Comparative Genome Analysis | $2500.00 USD (flat price) | |
Custom scripting and special projects | $275.00 USD (per hour) | |
Other Services | Visualizations, Report Generation, Customizations to our platform, Training, Scientific support, Presentation support, etc. | $300.00 USD (per hour) |
Read Filtering and Cleaning | $115.00 USD (per sample) | |
Exome Analysis | $2500.00 USD (flat price) | |
Small RNA Mapping | $100.00 USD (per sample) | |
SNP / Indel Mapping | $100.00 USD (per sample) | |
SNP / Indel Calling | $100.00 USD (per sample) | |
SNP/SV/CNV Discovery | $100.00 USD (per sample) | |
Genome Annotation | $85.00 USD (per sample) | |
Small RNA Annotation | $85.00 USD (per sample) | |
Transcriptome Annotation | $85.00 USD (per sample) | |
Variant Annotation | $85.00 USD (per sample) |
At NXT-Dx we can offer SE50, PE50 and PE100 sequencing on the Illumina HiSeq. On top of this we can also offer different sequencing settings on the Illumina MiSeq and shortly we will also be able to offer sequencing on the Illumina NextSeq.
We can offer sequencing of already prepared libraries but we can also offer full-scope projects whereby we receive cells, tissue, gDNA or RNA and take care of the sample preparation, library prep, sequencing and bio-informatics analysis.
We have worked with samples from all kind of species (mammalian, plant, bacterial) and all kind of cell types.
We pride ourselves in having close contact with our customers and only one single contact point. Also after the delivery of the data, we remain available to answer any questions customers might have on their data, their analysis, etc.
Years in service: 13Other services offered by NXT-Dx:
Service | Description | Price |
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Differential Gene Expression Analysis | $170.00 USD (per hour) | |
Transcriptome Mapping | $170.00 USD (per hour) | |
Comparative Genome Analysis | $170.00 USD (per hour) | |
Custom scripting and special projects | $170.00 USD (per hour) | |
Read Filtering and Cleaning | $170.00 USD (per hour) | |
Exome Analysis | $170.00 USD (per hour) | |
ChIP-Seq Analysis | $170.00 USD (per hour) | |
Small RNA Mapping | $170.00 USD (per hour) | |
Genome Mapping | $170.00 USD (per hour) | |
Targeted Capture Analysis | $170.00 USD (per hour) | |
Genome Annotation | $170.00 USD (per hour) | |
Small RNA Annotation | $170.00 USD (per hour) | |
Methylation Analysis | $170.00 USD (per hour) | |
Transcriptome Annotation | $170.00 USD (per hour) | |
Variant Annotation | $170.00 USD (per hour) | |
Base Calling | $170.00 USD (per hour) |
Leveraging the expanding prospects of microbiome research, Leucine Rich Bion has integrated a robust computational pipeline "MetaRich" into a user-friendlyplatform for comprehensive analyses of any microbiome data.
After rigorous testing & validation of several leading microbiome analysis pipelines, tools & databases, we have compiled “MetaRich” to analyze both 16s rDNA & shotgun metagenomes, duly supplemented by our in-house computational tools. MetaRich will assist both researchers & industry personnel who are in pursuit of discovering biological insights within complex microbial systems & will ease the arduous task of large-scale microbiome data analysis.
Years in service: 10Other services offered by Leucine Rich Bio:
Service | Description | Price |
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Microbiome Analysis | For Individual Samples Abundance data - Raw & % Normalized Abundance Bar plots - Raw & % Normalized Pie charts - Kingdom through Phylum Alpha diversity Plots & index value table AMR Prediction Comparative Analyses Differential abundance data (across groups) Abundance Bar plots Raw & % Normalized Alpha diversity Plots & index value table Beta diversity Plots & index value table PCoA analysis & pl… | $9.00 USD (per sample) |
Dreamgenics is a biotech company that offers bioinformatics analysis services for genomic, transcriptomic and metagenomic NGS data using our Genome One software. Genome One (CE-IVD certified) is an advanced tool that allows the integration of all the bioinformatics solutions required for the study, including read alignment, variant calling and annotation. Our analyses identify high-quality genomic variants through high sensitivity and specificity standards, extracting important biological information and reducing validation costs. The services that we offer are the following: WGS, WES, Gene panels, Transcriptomics (RNA-Seq) and Metagenomics. Additionally, we hand in the results using our web viewer Genome One Reports (https://www.dreamgenics.com/en/genome-one/).
The use of our bioinformatics tools allows us to offer you high-quality results in a fast and simple way. By using our analysis services, you considerably reduce costs and the investment in technological devices, informatics and qualified professionals.
Lastly, we are an ISO 9001:2015, UNE-EN ISO 13485:2018 and UNE-ISO/IEC 27001:2017 certified company which represents our commitment to provide our customers with products and services that meet the most demanding quality standards.
Years in service: 13Other services offered by Dreamgenics:
Service | Description | Price |
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Single Cell RNA-Seq Analysis | We offer Single cell RNA-Seq bioinformatic analysis from FASTQ files including: - Sequencing and mapping quality control. - Alignment of reads against reference genome. - Quantification of gene expression at the single cell level. - Reduction of data dimensionality. - Clustering or division of cells into different groups and subgroups. - Differential gene expression analysis. - Study of the evol… | $200.00 USD (per sample) |
Differential Gene Expression Analysis | Our RNA-Seq analysis includes: Quality control, Alignment, Quantification of gene expression, Differential gene expression analysis and Enrichment study of gene ontologies and pathways. It can also include the study of isoforms generated in alternative splicing events and the identification of other RNAs (smallRNAs and ncRNAs)*. We will deliver the results to the Genohub data bucket as well as t… | $90.00 USD (per sample) |
Exome Analysis | Our bioinformatics analysis includes: Quality control, Alignment, Detection of high quality variants (SNVs, translocations and CNVs), Filtering of common variants, Annotation of variants obtained with multiple databases and prediction algorithms and Comparison between samples and extraction of recurrent variants. We will deliver the results to the Genohub data bucket as well as through our platf… | $80.00 USD (per sample) |
Transcriptome Annotation | Our RNA-Seq analysis includes: Quality control, Alignment, Quantification of gene expression, Differential gene expression analysis and Enrichment study of gene ontologies and pathways. It can also include the study of isoforms generated in alternative splicing events and the identification of other RNAs (smallRNAs and ncRNAs)*. We will deliver the results to the Genohub data bucket as well as t… | $90.00 USD (per sample) |
Igenbio, Inc. develops genome analysis products and services for the life science industry. Our scientists have broad experience in both in silico and wet lab sequencing, research and development with more than 100 relevant publications in these areas. Igenbio has a proven track record of delivering scientific results for academic, governmental, and industrial institutions for two decades.
Our expertise includes, but is not limited to:
Igenbio has a large, secure cloud infrastructure that can expand to meet any project demands you may have - from large number of samples to quick turnaround times. Please inquire for more information.
At Igenbio, Inc. security of your data is a top priority. Your data is protected by best practices in physical and data security measures. This includes 24/7 physical security and monitoring, and the best available encryption for storage and transmission. Our employees are trained and knowledgeable in data security best practices.
Years in service: 11Other services offered by Igenbio, Inc.:
Service | Description | Price |
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Differential Gene Expression Analysis | Inquire | |
Comparative Genome Analysis | Inquire | |
Metagenomic Analysis | - Quality analytics of sequence reads - State of the art sample processing using academically-proven tools such as DADA2 and Kraken2 that work on all sequencing platforms such as Illumina & Pacific Biosciences. - Fast and accurate taxa identification using state-of-the-art machine learning algorithms that can identify taxa down to the species level. - Supports public databases (such as Silva,… | Inquire |
SNP / Indel Calling | Inquire | |
SNP/SV/CNV Discovery | Inquire | |
Genome Annotation | Gene Annotation and Functional Assignments placing genes into their functional or metabolic context utilizing KEGG Pathways, Gene Ontology, and the ERGO database. Optional - Identification of Antibiotic Resistance - including the genes, pathways, and specific drugs | Inquire |
Transcriptome de novo Assembly | Inquire | |
Transcriptome Annotation | Inquire | |
Transcriptome Annotation | Inquire | |
Variant Annotation | Inquire | |
Whole Genome de novo Assembly | All current sequencing technologies support - Illumina, PacBio, Oxford Nanopore, 10x, Hi-C, Ion Torrent, and others. Igenbio scientists utilize a multitude of assembly strategies - denovo, reference based, hybrid, metagenomic, and others. | Inquire |
Base Calling | Inquire | |
Microbiome Analysis | - Quality analytics of sequence reads - State of the art sample processing using academically-proven tools such as DADA2 or Kraken2 that work on all sequencing platforms such as Illumina & Pacific Biosciences. - Fast and accurate taxa identification using state-of-the-art machine learning algorithms that can identify taxa down to the species level. - Supports public databases (such as Silva, Gree… | Inquire |
genexa is a genomic data analysis provider located in Switzerland. Our bioinformatics services are centered around de novo assembly of genomes and metagenomes. We focus on processing, analysis, and interpretation of your genomics data. For all our fields of expertise, we offer to perform the entire analysis workflow from raw data to documentation, but also consulting and troubleshooting if required. genexa also provides resources to run computationally demanding tasks for specific jobs if you have an existing analysis workflow, but lack the computational resources to run it on large amounts of data. For further information check: genexa.ch
Years in service: 10Other services offered by genexa Ltd:
Service | Description | Price |
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Differential Gene Expression Analysis | Inquire | |
Comparative Genome Analysis | Inquire | |
Custom scripting and special projects | Inquire | |
Other Services | We offer bioinformatics services using long-read sequencing (PacBio & Oxford Nanopore Technologies). We have several years of experience using third-gen. technologies, mainly applying these technologies for de novo assembly of individual genomes and metagenomes. We also offer transcriptomic analyses using long-read technologies. If you want to start using PacBio or Oxford Nanopore Technologies,… | Inquire |
Read Filtering and Cleaning | Inquire | |
Metagenomic Analysis | Inquire | |
SNP / Indel Calling | Inquire | |
Genome Annotation | Inquire | |
Transcriptome Annotation | Inquire | |
Variant Annotation | Inquire | |
Whole Genome de novo Assembly | Inquire | |
Base Calling | Inquire | |
Microbiome Analysis | Inquire |
HybridStat is a company bringing together a team of highly qualified and motivated scientists and developers, whose expertise spans a variety of statistics and computer science domains. Main HybridStat’s services are centered on bioinformatics, biostatistics and analytics of high-throughput data derived from modern biological technologies such as Next Generation Sequencing (NGS), DNA microarrays and Mass Spectrometry. In addition, HybridStat offers customized software solutions regarding the above.
Regarding NGS, HybridStat offers a variety of one-stop shop data analysis and analytics services, spanning from genome alignments and preprocessing of raw short read fragments, up to analytical and specialized reports and figures describing the results of various NGS protocols including RNA-Seq (quality control, differential expression and splicing analysis, biochemical pathway enrichments etc.), ChIP-Seq (data normalization and peak calling, gene-binding site associations, methylation profiles, motif finding etc.), Whole Exome and Whole Genome Sequencing (data preprocessing, variant calling, filtering, annotation and interpretation, etc.) and Single Cell Sequencing data analysis, using both open source and optimized proprietary pipelines.
HybridStat, can also offer complete support to your organization through its advanced Whole Exome Sequencing analytics platform Clingon (www.clingon-mds.com). Clingon is a complete, integrated one-stop clinical genomics and medical decision support platform which performs data analysis from raw data up to the generation of clinical reports. It uniquely integrates and curates a handful of resources regarding gene-disease and gene product-drug associations as well as curated variant annotation data towards more timely and accurate results and the optimal design of personalized treatment plans.
Years in service: 10Other services offered by HybridStat Predictive Analytics:
Service | Description | Price |
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Differential Gene Expression Analysis | A fully descriptive and interactive report is provided. | $300.00 USD (flat price) |
Comparative Genome Analysis | $60.00 USD (per hour) | |
Custom scripting and special projects | $70.00 USD (per hour) | |
Other Services | $70.00 USD (per hour) | |
Read Filtering and Cleaning | $25.00 USD (per sample) | |
Read Filtering and Cleaning | $30.00 USD (per sample) | |
Read Filtering and Cleaning | $20.00 USD (per sample) | |
Exome Analysis | Exome analysis includes quality control, alignment to the reference genome, alignment statistics, variant calling, variant annotation with our proprietary annotation pipeline which guarantees better results especially in indels and gene-disease association reports. | $150.00 USD (per sample) |
Exome Analysis | Exome analysis includes quality control, alignment to the reference genome, alignment statistics, variant calling, variant annotation with our proprietary annotation pipeline which guarantees better results especially in indels and gene-disease association reports. | $170.00 USD (per sample) |
Exome Analysis | Exome analysis includes quality control, alignment to the reference genome, alignment statistics, variant calling, variant annotation with our proprietary annotation pipeline which guarantees better results especially in indels and gene-disease association reports. | $200.00 USD (per sample) |
ChIP-Seq Analysis | ChIP-Seq analysis includes alignment to the reference genome, quality control, enriched region (peak) calling and association of enriched regions with nearby genes. | $70.00 USD (per sample) |
ChIP-Seq Analysis | ChIP-Seq analysis includes alignment to the reference genome, quality control, enriched region (peak) calling and association of enriched regions with nearby genes. | $85.00 USD (per sample) |
ChIP-Seq Analysis | ChIP-Seq analysis includes alignment to the reference genome, quality control, enriched region (peak) calling and association of enriched regions with nearby genes. | $100.00 USD (per sample) |
SNP / Indel Mapping | $30.00 USD (per sample) | |
SNP / Indel Mapping | $25.00 USD (per sample) | |
SNP / Indel Mapping | $40.00 USD (per sample) | |
Genome Mapping | $25.00 USD (per sample) | |
Genome Mapping | $20.00 USD (per sample) | |
Genome Mapping | $30.00 USD (per sample) | |
SNP / Indel Calling | $40.00 USD (per sample) | |
SNP / Indel Calling | $45.00 USD (per sample) | |
SNP / Indel Calling | $50.00 USD (per sample) | |
Variant Annotation | Variant annotation is performed with our proprietary annotation pipeline which guarantees better results especially in indels. | $40.00 USD (per sample) |
Variant Annotation | Variant annotation is performed with our proprietary annotation pipeline which guarantees better results especially in indels. | $50.00 USD (per sample) |
Variant Annotation | Variant annotation is performed with our proprietary annotation pipeline which guarantees better results especially in indels. | $60.00 USD (per sample) |
Whole Genome de novo Assembly | $1000.00 USD (flat price) |
ChunLab specializes in NGS and bioinformatics for the fields of bacterial genomics, metagenomics, transcriptomics and bacterial identifications.
ChunLab maintains a portfolio of leading NGS technology to provide you a one-stop fully integrated NGS sequencing to bioinformatics solution.
While other companies deliver massive amounts of NGS data in Excel or text file formats, we go a step further to provide in-depth bioinformatics aligned with client's goal of discovery. Moreover, we provide sophisticated yet easy to use cloud-based tools, with our full-service solution, enabling quick visualizations, secondary analysis and comparative analysis.
Our user-friendly bioinformatics web tools are each tailored for a specific research need giving you true insight into your data without the aid of a bioinformatics specialist. Furthermore, by managing the entire pipeline, we ensure quality control at every step of the process meaning you have more meaningful downstream analysis.
Years in service: 15Other services offered by ChunLab:
Service | Description | Price |
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Genevia Technologies provides a wide range of microarray and next generation sequencing data analyses, and bioinformatics services to life science companies and academia. In addition, we offer bioinformatics consulting projects at a fixed price, and genome-wide experiments done in collaboration with the top service providers.
Our expertise is in handling multiple microarray (expression, copy number, ChIP, methylation, etc) and next-gen sequencing (DNA-seq, RNA-seq, MeDIP-seq, ChIP-seq, GRO-seq, etc) data simultaneously and effectively, and combining them with other data such as clinical variables or pathway information. We have experience in most common mammalian systems, but especially in multiple human cancers. We have also worked on data from multiple species of lower eucaryotes and bacteria.
We have access to dedicated file storage servers, a computing cluster, a computing grid (of over 1000 CPUs), and cloud computing capabilities.
Visit our homepage to read more about us and our bioinformatics as a service: www.genevia.fi
Other services offered by Genevia Technologies:
Service | Description | Price |
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Differential Gene Expression Analysis | Inquire | |
Transcriptome Mapping | Inquire | |
Comparative Genome Analysis | Inquire | |
Custom scripting and special projects | Inquire | |
Other Services | Inquire | |
Read Filtering and Cleaning | Inquire | |
ChIP-Seq Analysis | Inquire | |
Small RNA Mapping | Inquire | |
SNP / Indel Mapping | Inquire | |
Metagenomic Analysis | Inquire | |
SNP / Indel Calling | Inquire | |
SNP/SV/CNV Discovery | Inquire | |
Targeted Capture Analysis | Inquire | |
Small RNA Annotation | Inquire | |
Methylation Analysis | Inquire | |
Transcriptome de novo Assembly | Inquire | |
Transcriptome Annotation | Inquire | |
Variant Annotation | Inquire | |
Base Calling | Inquire |